BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B01SP1|AL429329
(947 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 522 e-148
3x_Contig285 438 e-122
>3x_Contig924
Length = 2007
Score = 522 bits (261), Expect = e-148
Identities = 281/289 (97%)
Strand = Plus / Plus
Query: 1 ttctttttattaaaataaatgaacctttaccttcaaaaaatcctacaaatcattctaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 ttctttttattaaaataaatgaacctttaccttcaaaaaatcctacaaatcattctaaaa 1772
Query: 61 atttttgatcaggaacagaatttataggtttaaattctttatattttaaattaaattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 atttttgatcaggaacagaatttataggtttaaattctttatattttaaattaaattcat 1832
Query: 121 caaaataaaatttatcttgattaaattctaaatttttaaatgaagataatcataaattaa 180
|||||||||||||||||||||||||||||||||| |||||||||||||||| || ||
Sbjct: 1833 caaaataaaatttatcttgattaaattctaaattgttaaatgaagataatcggggatgaa 1892
Query: 181 tattatatttatratcataaattactatataaratggcatagaaaacaaatgttggtata 240
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1893 tattatatttataatcataaattactatataaaatggcatagaaaacaaatgttggtata 1952
Query: 241 aaacagggtcaccaccacctgctacttcgaagaatgaagtattgaagtt 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 aaacagggtcaccaccacctgctacttcgaagaatgaagtattgaagtt 2001
>3x_Contig285
Length = 777
Score = 438 bits (219), Expect = e-122
Identities = 220/221 (99%)
Strand = Plus / Minus
Query: 722 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 715
Query: 782 tccgcttaaaacttgattacctggtgcggctaactctaatctaatgattaaagacatggc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tccgcttaaaacttgattacctggtgcggctaactctaatctaatgattaaagacatggc 655
Query: 842 agtacctgccataccacagaaaatagcaaagataaagtataaaacagcaatatctttagc 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agtacctgccataccacagaaaatagcaaagataaagtataaaacagcaatatctttagc 595
Query: 902 atttgtagaatataatcatctttcgatcattaattwatttt 942
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 594 atttgtagaatataatcatctttcgatcattaatttatttt 554
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8931
Number of Sequences: 1807
Number of extensions: 8931
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 2
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)